Tokyo Baptist Church in Daikanyama, Shibuya
If you are a Baptist and looking for a church to attend, Tokyo Baptist Church is perhaps one of the prominent one in Tokyo to attend.
Excerpt from Wikipedia:
Tokyo Baptist Church (organized on January 5, 1958) is an English speaking international Baptist Church located in Shibuya, situated in downtown Tokyo, Japan. Tokyo Baptist has 6 services every weekend (including a youth service on Sunday and an extra service on Saturdays) with an approximate attendance of 1,500.
You can always check their website below: